BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E11SP1|AL428927
(864 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1664 1630 0.0
>3x_Contig1664
Length = 15696
Score = 1630 bits (820), Expect = 0.0
Identities = 854/864 (98%), Gaps = 3/864 (0%)
Strand = Plus / Plus
Query: 1 aaatcacatttcagtgaagtcacctgtccagacatktcactgtaaagattgaagggatgt 60
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 9804 aaatcacatttcagtgaagtcacctg-ccagacatgtcactgtaaagattgaagggatgt 9862
Query: 61 tctgttcaaattgtcccgtacgtacgattaaatctttgcttttacatcgctaatgcagta 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 9863 tctgttcaaattgtcccgtacgtacgattaaatctttgcttg-acatcgctaatgcag-a 9920
Query: 121 gttaattattgacaatactgatgaattaactttgaagcatccgtacattaagtttacgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9921 gttaattattgacaatactgatgaattaactttgaagcatccgtacattaagtttacgta 9980
Query: 181 tattcctaatkttgaacgaggcattaccatcagaaatatattcagcaagatcacagaaga 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9981 tattcctaatgttgaacgaggcattaccatcagaaatatattcagcaagatcacagaaga 10040
Query: 241 attgactactgaggagcataaggatattaaagttgtcatcgtaaaggaagttactttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10041 attgactactgaggagcataaggatattaaagttgtcatcgtaaaggaagttactttgga 10100
Query: 301 ggaacacttgaaagaaatggcgaagaaagaaacttggagtattgcaaagagattaattgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10101 ggaacacttgaaagaaatggcgaagaaagaaacttggagtattgcaaagagattaattgc 10160
Query: 361 tgttactgtaatggccatccctacctttgcttttggtattgtcggcatggcgttattacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10161 tgttactgtaatggccatccctacctttgcttttggtattgtcggcatggcgttattacc 10220
Query: 421 ttcgagtaataagtttagagaatgggtggatgaaccgacttgggtaggtaatgtatcaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10221 ttcgagtaataagtttagagaatgggtggatgaaccgacttgggtaggtaatgtatcaag 10280
Query: 481 ggtcgttttgatcttatttattatcagtacgccagtttacttctttgtagcggatatctt 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281 ggtcgtttggatcttatttattatcagtacgccagtttacttctttgtagcggatatctt 10340
Query: 541 tcacagaaaagccgtcaaagagatctactcactttggaaacactccaacaactggaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10341 tcacagaaaagccgtcaaagagatctactcactttggaaacactccaacaactggaaaag 10400
Query: 601 gcgcctattcagattcggaagtatgaatcttctaatgtcactaggaacaactgttgcata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10401 gcgcctattcagattcggaagtatgaatcttctaatgtcactaggaacaactgttgcata 10460
Query: 661 ttttgccagtattgctctcttaggaattgcagcaagtagaccaagagatacatcagacag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10461 ttttgccagtattgctctcttaggaattgcagcaagtagaccaagagatacatcagacag 10520
Query: 721 ccgcatgcataaaggtttgtcaacaacttactttgactctgttgtattttthactttctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10521 ccgcatgcataaaggtttgtcaacaacttactttgactctgttgtatttttaactttctt 10580
Query: 781 tttactcatcggccgtttgttggagagtcttgctaagactaaaacagcatcagctattag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10581 tttactcatcggccgtttgttggagagtcttgctaagactaaaacagcatcagctattag 10640
Query: 841 taatttgagctcattttagcmaga 864
|||||||||||||||| ||| |||
Sbjct: 10641 taatttgagctcatttaagcaaga 10664
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6206
Number of Sequences: 1807
Number of extensions: 6206
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 864
length of database: 10,358,551
effective HSP length: 16
effective length of query: 848
effective length of database: 10,329,639
effective search space: 8759533872
effective search space used: 8759533872
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)